Engineering Biology projects

Applications for fully-funded 4 year PhD studentships starting in Sept 2026 are now closed

For studentships starting in Sept 2027, projects to apply to will be advertised in Oct 2026

Below are projects that were advertised for studentships starting in Sept 2026.  We are no longer accepting applications to these projects, but remain viewable to give a flavour of the types of projects across the DTP.  Exception: If you have external-funding (including self-funding), these projects are still available to apply to – further information.

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The research theme encompasses the following areas.  Click on the link below to be taken to these projects, or scroll though our full list of projects below.

This theme encompasses:

  • all aspects of synthetic or engineering biology, from innovation to application including the development and functional application of molecular biosensors.
  • biophysical aspects of organismal biology across the scale.
  • research on antimicrobials and antimicrobial resistance (AMR), form mechanisms to promising therapies.

*CASE: These are CASE DTP studentships. As part of the programme, you will be required to undertake a placement with the CASE partner for a minimum of 3 months.

*AP: These are Standard DTP studentships with an associate partner where you will be required to spend time with each of the partners. You will then be registered for your postgraduate studies at one of the partner universities of the lead supervisors. 

*JD: This project is in collaboration with the University of Bristol and the University of the West of England (UWE) and subject to a joint degree award. Successful applicants will be registered at both these institutions, and graduates will be awarded a joint degree from these two institutions upon successful completion of the PhD programme.

The 'host institution' is where you will be mainly based throughout your PhD.  Of note, some projects may involve fieldwork or time away from the listed host institution for e.g. time spent with others within your supervisory team, collaborating university, collaborator or on a CASE/PIPS placement. 

To help you decide on your PhD project, you can gain a detailed insight into the working style of the main supervisor and the research environment you will be part of, by visiting our meet our supervisors webpage or ‘clicking’ on the supervisor listed in bold below. You can also find out more about the second supervisor by ‘clicking’ on their name below.

Antimicrobial & Therapeutic Innovation

 

ID PROJECT TITLE

MAIN SUPERVISORY TEAM

Main supervisor (bold) + second supervisor – Or equivalents 

HOST INSTITUTION

(also the registered university unless otherwise stated)

STUDENTSHIP TYPE

KEYWORDS
145 Antiphage defence systems and antimicrobial resistance: two sides of the same coin?

Dr Stefano Pagliara

Prof Tiffany Taylor

University of Exeter (Streatham)

Studentship type: Standard

Microbiology, antimicrobial resistance, artificial intelligence, phage biology, experimental evolution
259 Drugging a Hunger Receptor: Structure and Mechanism of Agonist Binding to Novel Vestibular Site in FFAR1

Prof Imre Berger

Dr Robin Corey

University of Bristol

Studentship type: CASE

G protein-coupled receptors (GPCRs), obesity, drug discovery, computational biology, cryo-EM
141 Engineering prophages to kill Burkholderia bacteria for phage therapy and biotechnology

Prof Eshwar Mahenthiralingam

Dr Ben Temperton

Cardiff University

Studentship type: CASE

Bacteriophages, Burkholderia bacteria, Phage Therapy, Synthetic biology, Cystic Fibrosis
306 How Microbes Work Together: Using Multi-Omics to Decode Polymicrobial Interactions and Advance AI-Assisted Rapid Diagnostics

Dr Khushboo Borah Slater

Prof Stineke van Houte

University of Exeter (Streatham)

Studentship type: CASE

Microbial-interactions, Infection, AI-diagnostics, Multi-omics, Tuberculosis
231 Understanding the effects of antibiotics on bacteriophage infectivity

Prof Stineke van Houte

Prof Tiffany Taylor

University of Exeter (Penryn)

Studentship type: Standard

Microbiology, bacteriophage antibiotics, phage therapy defence
218 Unlocking the Secrets of Structure–Function Relationships in Antibiotic Resistance Enzymes

Dr Sofia Oliveira

Prof James Spencer

University of Bristol

Studentship type: Standard

Antibiotic resistance, Beta-lactamases, enzymes, structure and dynamics, allosteric networks

Biophysics, Nanotech & Biosensors

 

ID PROJECT TITLE

MAIN SUPERVISORY TEAM

Main supervisor (bold) + second supervisor – Or equivalents 

HOST INSTITUTION

(also the registered university unless otherwise stated)

STUDENTSHIP TYPE

KEYWORDS
280 CRYCT – A peptide magnetosensor to engineer magnetic field sensitivity in biological systems

Dr Daniel Kattnig

Dr Jonathan Phillips

University of Exeter (Streatham)

Studentship type: CASE

Magnetoreception, cryptochrome, quantum biology, spectroscopy, protein engineering
294 Learning to design dynamic proteins

Dr Jonathan Phillips

Dr Fabio Parmeggiani

University of Exeter (Streatham)

Studentship type: Standard

Protein design, Generative AI, Mathematical modelling, Structural proteomics, Gene editing
329 Mechanism of host-pathogen interactions at the ciliated surface

Prof Kirsty Wan

Prof Andrew Preston

University of Exeter (Streatham)

Studentship type: Standard

Biophysics, microbiology, cilia, signalling, cell motility
338 Powering Plants with Photonics: using biophotovoltaics to understand how plants use nanostructures to manipulate light

Dr Heather Whitney

Dr Bethan Charles

University of Bristol

Studentship type: Standard

Photosynthesis, plant photonic nanomaterials, plant-light interactions, sustainable solutions
184 The Ozempic Receptor in Action: Dissecting Signalling Pathways of Drugs and Ligands

Prof Frank Vollmer

Prof Imre Berger

University of Exeter (Streatham)

Studentship type: Standard

Membrane biophysics, biological interactions and signalling, nanotechnology, biosensors, single molecule sensing, photonic sensors

Protein Engineering & Functional Biomolecular Systems

ID PROJECT TITLE

MAIN SUPERVISORY TEAM

Main supervisor (bold) + second supervisor – Or equivalents 

HOST INSTITUTION

(also the registered university unless otherwise stated)

STUDENTSHIP TYPE

KEYWORDS
195 Elucidating snake venom metalloproteinase mechanisms for new snakebite treatments

Prof Imre Berger

Prof Nicholas Harmer

University of Bristol

Studentship type: Standard

Snakebite treatment, toxins, haemotoxic snake venom metalloproteinases (SVMPs), X-ray crystallography, enzymology
241 Engineering enzymes for photobiocatalysis

Dr Guto Rhys

Dr Susannah Coote

Cardiff University

Studentship type: Standard

Biocatalysis, photocatalysis, enzyme engineering, engineering biology, protein design
281 Mechanistic Dissection and Engineering of Modular Polyketide Synthases

Dr John Crosby

Prof Matthew Crump

University of Bristol

Studentship type: Standard

Natural products, chemical biology, biochemistry, structural analysis, chemical synthesis
319 Mercury rising: Unifying molecular principles of biological temperature sensing

Dr Vinod Kumar

Dr Jonathan Phillips

University of Exeter (Streatham)

Studentship type: Standard

Temperature sensing, Arabidopsis, Molecular biology, epigenetics, structural proteomics
350 Model and AI-guided genome design

Prof Lucia Marucci

Prof Claire Grierson

University of Bristol

Studentship type: Standard

Whole-cell modelling, AI, genome design, metabolic engineering, Escherichia Coli
232 Rational Design of Novel Degraders for Targeted Protein Degradation

Dr Julien Licchesi

Prof Matthew Crump

University of Bath

Studentship type: Standard

Targeted protein degradation, ubiquitin, chemical biology, PROTAC, Aptamer
225 Structural and Transcriptional Insights into Therapeutic Jumbophages

Dr Vicki Gold

Dr Ben Temperton

University of Exeter (Streatham)

Studentship type: Standard

Microbiology, Bacteriophage, CryoEM, Protein structure, Transcriptomics
315 Understanding the Dynamics of NFkappaB transcription factor complex formation

Prof Richard Clarkson

Prof Dafydd Jones

Cardiff University

Studentship type: Standard

Transcription factors, bimolecular interactions, bioimaging, protein engineering, molecular dynamics
118 Understanding the molecular mechanism of the MADS bacterial immune system and its synergy with CRISPR-Cas

Prof Mark Szczelkun

Dr Alan Cheung

University of Bristol

Studentship type: CASE

Prokaryotic defence systems, CRISPR-Cas, Protein complex assembly, Enzymology, Bacteriophages
346 Unlocking Fungal Biosynthetic Potential to Combat Antimicrobial Resistance

Dr Claudio Greco

Prof Matthew Crump

Swansea University / University of Bristol

Registered University: Swansea University

Studentship type: Standard with Associate Partner

Microbiology, Protein engineering, Natural products, Antimicrobials, Biosynthesis

Other

 ID PROJECT TITLE

MAIN SUPERVISORY TEAM

Main supervisor (bold) + second supervisor – Or equivalents 

HOST INSTITUTION

(also the registered university unless otherwise stated)

STUDENTSHIP TYPE

KEYWORDS
212 Developing targeted covalent macrocycles to combat immune-mediated diseases

Dr Maisem Laabei

Dr Scott Lovell

University of Bristol

Studentship type: Standard

Complement, peptide phage display, covalent inhibitors, chemical proteomics, drug discovery
349 Development of next generation therapeutics for enhanced immune protection.

Dr Katja Klein

Dr Jamie Mann

University of Bristol

Studentship type: Standard

Microbiology, Molecular Biology, Immunology